ESU13473

Description : DNA binding HTH domain, Psq-type

Gene families : OG_03_0001846 (OF) Phylogenetic Tree(s): OG0001846_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ESU13473
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
CAK43239	No alias	Tc5 transposase DNA-binding domain	0.06	OF
CAK43240	No alias	No description available	0.07	OF
CBF74754	No alias	conserved hypothetical protein	0.09	OF
EAL88266	No alias	conserved hypothetical protein	0.04	OF
EDO04494	No alias	DNA binding HTH domain, Psq-type	0.03	OF
EGR50671	No alias	DNA binding HTH domain, Psq-type	0.03	OF
MGG_13165T0	No alias	Putative uncharacterized protein...	0.04	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006600	HTH_CenpB_DNA-bd_dom	204	265
IPR007889	HTH_Psq	135	186

External Links

No external refs found!