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AFR93450


Description : transcription elongation factor SPT6;HHH domain;Holliday-junction resolvase-like of SPT6;Spt5 C-terminal nonapeptide repeat binding Spt4;SH2 domain;Helix-hairpin-helix motif;Acidic N-terminal SPT6;Helix-turn-helix DNA-binding domain of SPT6


Gene families : OG_03_0002299 (OF) Phylogenetic Tree(s): OG0002299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AFR93450
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AOA69963 No alias Helix-turn-helix DNA-binding domain of Spt6 0.13 OF
CAG82593 No alias Spt6, SH2 domain 0.06 OF
CAK40869 No alias HHH domain 0.04 OF
CBF82740 No alias Transcription elongation factor spt6 0.09 OF
EAA29618 No alias S1 domain 0.07 OF
EAL92977 No alias transcription elongation factor SPT6, putative 0.12 OF
EAU88502 No alias transcription elongation factor SPT6 0.03 OF
EGR50631 No alias Spt6 acidic, N-terminal domain 0.13 OF
ESU16548 No alias transcription elongation factor SPT6 0.07 OF
KHC72099 No alias transcription elongation factor SPT6;Acidic N-terminal... 0.03 OF
MGG_11491T0 No alias Transcription elongation factor SPT6... 0.05 OF
POW06379 No alias HHH domain 9;Spt6 acidic, N-terminal... 0.03 OF
SPAC1F7.01c.1 No alias nucleosome remodeling protein Spt6... 0.1 OF
YGR116W No alias Nucleosome remodeling protein; functions in various... 0.06 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041692 HHH_9 1012 1078
IPR028231 Spt6_YqgF 718 795
IPR028231 Spt6_YqgF 799 889
IPR035420 Spt6_SH2 1220 1432
IPR032706 Spt6_HHH 894 994
IPR028083 Spt6_acidic_N_dom 24 117
IPR028088 Spt6_HTH_DNA-bd_dom 295 418
No external refs found!