EFI28143

Description : transcription factor

Gene families : OG_03_0002056 (OF) Phylogenetic Tree(s): OG0002056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EFI28143
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
CAG79960	No alias	MIF4G-like, type 3	0.02	OF
CAK39364	No alias	MIF4G domain	0.02	OF
CBF71264	No alias	nonsense-mediated mRNA decay factor	0.05	OF
EDN96959	No alias	Up-frameshift suppressor 2, C-terminal	0.02	OF
KHC81414	No alias	hypothetical protein;MIF4G domain;Up-frameshift suppressor 2	0.01	OF
YHR077C	No alias	Protein involved in the nonsense-mediated mRNA decay...	0.03	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003890	MIF4G-like_typ-3	703	909
IPR003890	MIF4G-like_typ-3	505	676
IPR007193	Upf2/Nmd2_C	986	1112

External Links

No external refs found!