EAU89829

Description : transcription activator snf2l1

Gene families : OG_03_0001252 (OF) Phylogenetic Tree(s): OG0001252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EAU89829
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AFR98979	No alias	transcription activator snf2l1;SNF2 family N-terminal...	0.03	OF
AOA66961	No alias	SNF2-related, N-terminal domain	0.02	OF
CAG79034	No alias	SNF2-related, N-terminal domain	0.02	OF
CAK43969	No alias	HAND	0.05	OF
CBF81492	No alias	SNF2 family helicase/ATPase, putative	0.02	OF
EAA27312	No alias	ISWI, HAND domain	0.04	OF
EAL89447	No alias	SNF2 family helicase/ATPase, putative	0.03	OF
EED77797	No alias	Helicase, C-terminal	0.02	OF
EGR50860	No alias	Helicase, C-terminal	0.03	OF
ESU16960	No alias	ISWI chromatin remodeling complex ATPase ISW1	0.03	OF
KHC79160	No alias	hypothetical protein;SLIDE;Helicase conserved C-terminal...	0.03	OF
KHC83492	No alias	hypothetical protein;SNF2 family N-terminal...	0.02	OF
POW09339	No alias	ISWI, HAND domain;Helicase, C-terminal;SNF2-related,...	0.01	OF
YBR245C	No alias	ATPase subunit of imitation-switch (ISWI) class...	0.01	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003682	chromatin binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0031491	nucleosome binding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043044	ATP-dependent chromatin remodeling	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	454	565
IPR000330	SNF2_N	152	430
IPR020838	DBINO	18	71
IPR015195	SLIDE	929	1041
IPR015194	ISWI_HAND-dom	710	816

External Links

No external refs found!

EAU89829

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation