Description : transcription activator snf2l1

Gene families : OG_03_0001252 (OF) Phylogenetic Tree(s): OG0001252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EAU89829
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AFR98979 No alias transcription activator snf2l1;SNF2 family N-terminal... 0.03 OF
AOA66961 No alias SNF2-related, N-terminal domain 0.02 OF
CAG79034 No alias SNF2-related, N-terminal domain 0.02 OF
CAK43969 No alias HAND 0.05 OF
CBF81492 No alias SNF2 family helicase/ATPase, putative 0.02 OF
EAA27312 No alias ISWI, HAND domain 0.04 OF
EAL89447 No alias SNF2 family helicase/ATPase, putative 0.03 OF
EED77797 No alias Helicase, C-terminal 0.02 OF
EGR50860 No alias Helicase, C-terminal 0.03 OF
ESU16960 No alias ISWI chromatin remodeling complex ATPase ISW1 0.03 OF
KHC79160 No alias hypothetical protein;SLIDE;Helicase conserved C-terminal... 0.03 OF
KHC83492 No alias hypothetical protein;SNF2 family N-terminal... 0.02 OF
POW09339 No alias ISWI, HAND domain;Helicase, C-terminal;SNF2-related,... 0.01 OF
YBR245C No alias ATPase subunit of imitation-switch (ISWI) class... 0.01 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006338 chromatin remodeling IEA Interproscan
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA Interproscan
MF GO:0031491 nucleosome binding IEA Interproscan
BP GO:0043044 ATP-dependent chromatin remodeling IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 454 565
IPR000330 SNF2_N 152 430
IPR020838 DBINO 18 71
IPR015195 SLIDE 929 1041
IPR015194 ISWI_HAND-dom 710 816
No external refs found!