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  5. YPR112C

YPR112C


Description : Essential conserved small ribosomal subunit (40s) synthesis factor; component of the 90S preribosome; required for production of 18S rRNA and small ribosomal subunit; contains five consensus RNA-binding domains and binds to the pre-rRNA at two sites within the 18S region [Source:SGD;Acc:S000006316]


Gene families : OG_03_0003163 (OF) Phylogenetic Tree(s): OG0003163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YPR112C
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR93691 No alias multiple RNA-binding domain-containing protein 1;RNA... 0.23 OF
AOA69969 No alias RNA recognition motif domain 0.33 OF
CAG83044 No alias RNA recognition motif domain 0.37 OF
CBF89520 No alias Multiple RNA-binding domain-containing protein 1 0.18 OF
EAA35778 No alias RNA recognition motif domain 0.25 OF
EAL88195 No alias pre-rRNA processing protein Mrd1, putative 0.29 OF
EDO03712 No alias RNA recognition motif domain 0.24 OF
EGR47415 No alias RNA recognition motif domain 0.29 OF
EJF58737 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.13 OF
ESU06132 No alias multiple RNA-binding domain-containing protein 1 0.07 OF
KHC80145 No alias multiple RNA-binding domain-containing protein 1;"RNA... 0.4 OF
MGG_01217T0 No alias Multiple RNA-binding domain-containing protein 1... 0.14 OF
SPBP22H7.02c.1 No alias RNA-binding protein Mrd1 (predicted)... 0.33 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 43 87
IPR000504 RRM_dom 534 594
IPR000504 RRM_dom 665 739
IPR000504 RRM_dom 347 417
IPR000504 RRM_dom 765 833
No external refs found!