YOR290C

Description : Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p [Source:SGD;Acc:S000005816]

Gene families : OG_03_0000765 (OF) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YOR290C
Cluster	HCCA: Cluster_56

Target	Alias	Description	ECC score	Gene Family Method
AFR98059	No alias	ATP-dependent helicase STH1/SNF2;Bromodomain;QLQ;SNF2...	0.1	OF
AOA67652	No alias	Helicase, C-terminal	0.03	OF
AOA70328	No alias	Glutamine-Leucine-Glutamine, QLQ	0.15	OF
CAG81384	No alias	Snf2, ATP coupling domain	0.15	OF
CAG81616	No alias	Snf2, ATP coupling domain	0.09	OF
CAK43037	No alias	Bromodomain	0.08	OF
CBF86520	No alias	catalytic subunit of the SWI/SNF chromatin remodeling complex	0.16	OF
EAA27892	No alias	Bromodomain	0.12	OF
EAL91962	No alias	RSC complex subunit (Sth1), putative	0.1	OF
EAU93321	No alias	SNF2-family ATP dependent chromatin remodeling factor snf21	0.09	OF
EDO04534	No alias	SNF2-related, N-terminal domain	0.06	OF
EED84787	No alias	Bromodomain	0.06	OF
EGR50940	No alias	Snf2, ATP coupling domain	0.14	OF
EJF58780	No alias	Bromodomain	0.04	OF
ESU13545	No alias	SNF2-family ATP-dependent chromatin remodeling factor snf22	0.13	OF
KHC78804	No alias	ATP-dependent helicase STH1/SNF2;Bromodomain;HSA;SNF2...	0.04	OF
KHC81282	No alias	ATP-dependent helicase STH1/SNF2;Helicase conserved...	0.11	OF
MGG_06388T0	No alias	SNF2 family ATP-dependent chromatin-remodeling factor...	0.09	OF
POV96926	No alias	Helicase/SANT-associated domain;Snf2, ATP coupling...	0.04	OF
SPAC1250.01.1	No alias	ATP-dependent DNA helicase Snf21 [Source:PomBase;Acc:SPAC1250.01]	0.05	OF
SPCC1620.14c.1	No alias	ATP-dependent DNA helicase Snf22...	0.09	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR029295	SnAC	1289	1369
IPR014978	Gln-Leu-Gln_QLQ	248	281
IPR001487	Bromodomain	1570	1641
IPR014012	HSA_dom	595	660
IPR001650	Helicase_C	1088	1201
IPR000330	SNF2_N	782	1064

External Links

No external refs found!

YOR290C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation