KHC72012

Description : ATP-dependent RNA helicase DOB1;rRNA-processing arch domain;DEAD/DEAH box helicase;Helicase conserved C-terminal domain

Gene families : OG_03_0002438 (OF) Phylogenetic Tree(s): OG0002438_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: KHC72012
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
AFR94744	No alias	ATP-dependent RNA helicase DOB1;rRNA-processing arch...	0.16	OF
AOA68690	No alias	rRNA-processing arch domain	0.1	OF
CAG80921	No alias	ATP-dependent RNA helicase Ski2, C-terminal	0.19	OF
CAK47920	No alias	DSHCT (NUC185) domain	0.21	OF
CBF77580	No alias	ATP dependent RNA helicase	0.19	OF
EAA27062	No alias	ATP-dependent RNA helicase Ski2, C-terminal	0.19	OF
EAL90072	No alias	ATP dependent RNA helicase (Dob1), putative	0.25	OF
EAU86800	No alias	MTR4	0.04	OF
EDO01477	No alias	DEAD/DEAH box helicase domain	0.24	OF
EGR48006	No alias	Helicase, C-terminal	0.14	OF
ESU06996	No alias	ATP-dependent RNA helicase DOB1	0.17	OF
MGG_03931T0	No alias	FRQ-interacting RNA helicase [Source:UniProtKB/TrEMBL;Acc:G4NH56]	0.09	OF
POW02478	No alias	ATP-dependent RNA helicase Ski2, C-terminal;DEAD/DEAH...	0.08	OF
SPAC17H9.02.1	No alias	TRAMP complex ATP-dependent RNA helicase (predicted)...	0.08	OF
SPAC6F12.16c.1	No alias	ATP-dependent RNA helicase, TRAMP complex subunit Mtr4...	0.17	OF
YJL050W	No alias	ATP-dependent 3'-5' RNA helicase of the DExD/H family;...	0.28	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025696	rRNA_proc-arch_dom	594	859
IPR011545	DEAD/DEAH_box_helicase_dom	143	290
IPR001650	Helicase_C	425	540

External Links

No external refs found!