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  5. YNL197C

YNL197C


Description : RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci; regulates genes involved in the cell cycle, sister chromatid cohesion, and stress response; acts as a cytoplasmic retention factor for Cdc28p and associated cyclins; regulates cell fate and dose-dependently regulates the critical cell size required for passage through Start; Tpk1p (PKA) mediated phosphorylation (S568) inhibits Whi3p function, decreasing its interaction with CLN3 mRNA; regulates ploidy [Source:SGD;Acc:S000005141]


Gene families : OG_03_0001451 (OF) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: YNL197C
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AFR99094 No alias cell wall integrity protein scw1;RNA recognition motif.... 0.02 OF
AOA68928 No alias RNA recognition motif domain 0.06 OF
CAG78135 No alias RNA recognition motif domain 0.06 OF
CAK38257 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 OF
CBF79932 No alias RNA binding protein 0.03 OF
EAA35481 No alias RNA recognition motif domain 0.03 OF
EAL91765 No alias RNA binding protein 0.02 OF
EGR50020 No alias RNA recognition motif domain 0.03 OF
EJF62224 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.03 OF
ESU14477 No alias hypothetical protein 0.03 OF
ESU14478 No alias hypothetical protein 0.03 OF
SPCC16C4.07.1 No alias RNA-binding protein Scw1 [Source:PomBase;Acc:SPCC16C4.07] 0.06 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 540 612
No external refs found!