YNL163C

Description : Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis; with Sdo1p, a guanine nucleotide exchange factor (GEF), promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; required for quality control check of newly made large ribosomal subunits before they are released into the pool of translating ribosomes [Source:SGD;Acc:S000005107]

Gene families : OG_03_0001594 (OF) Phylogenetic Tree(s): OG0001594_tree

Sequence : coding (download), protein (download)

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Type	Description	Actions
Neighborhood	HRR: YNL163C
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
AOA66589	No alias	Transcription factor, GTP-binding domain	0.03	OF
CAK42061	No alias	Elongation factor Tu GTP binding domain	0.04	OF
EAL91264	No alias	ribosome biogenesis protein Ria1, putative	0.07	OF
EGR48643	No alias	Translation elongation factor EFTu-like, domain 2	0.02	OF
ESA43223	No alias	Transcription factor, GTP-binding domain	0.01	OF
ESA43224	No alias	Transcription factor, GTP-binding domain	0.01	OF
ESA43225	No alias	Transcription factor, GTP-binding domain	0.01	OF
KHC83475	No alias	small GTP-binding protein domain;Elongation factor Tu...	0.04	OF
MGG_05265T0	No alias	Elongation factor 2 [Source:UniProtKB/TrEMBL;Acc:G4N5M6]	0.03	OF
POW15613	No alias	Transcription factor, GTP-binding domain;Elongation...	0.07	OF
SPCC553.08c.1	No alias	GTPase Ria1 (predicted) [Source:PomBase;Acc:SPCC553.08c]	0.13	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041095	EFG_II	677	739
IPR004161	EFTu-like_2	583	658
IPR000640	EFG_V-like	974	1054
IPR000795	TF_GTP-bd_dom	18	297

External Links

No external refs found!

YNL163C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation