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  5. YNL147W

YNL147W


Description : Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; protein abundance increases and forms cytoplasmic foci in response to DNA replication stress [Source:SGD;Acc:S000005091]


Gene families : OG_03_0000489 (OF) Phylogenetic Tree(s): OG0000489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YNL147W
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AFR97299 No alias small nuclear ribonucleoprotein G;LSM domain 0.02 OF
CAK44131 No alias LSM domain 0.02 OF
CAK47035 No alias LSM domain 0.02 OF
EAA29411 No alias LSM domain, eukaryotic/archaea-type 0.02 OF
EGR50280 No alias LSM domain, eukaryotic/archaea-type 0.03 OF
EJF61303 No alias LSM domain 0.03 OF
ESU05982 No alias LSM domain, eukaryotic/archaea-type 0.05 OF
KHC75235 No alias U6 snRNA-associated Sm-like protein LSm7;LSM domain 0.03 OF
POW15375 No alias LSM domain, eukaryotic/archaea-type 0.02 OF
POW16612 No alias LSM domain, eukaryotic/archaea-type 0.05 OF
SPBC4B4.05.1 No alias Sm snRNP core protein Smg1 [Source:PomBase;Acc:SPBC4B4.05] 0.04 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 29 103
No external refs found!