1. Home
  2. Species
  3. Saccharomyces cerevisiae
  4. Sequence
  5. YMR213W

YMR213W


Description : Essential splicing factor; associated with Prp19p and the spliceosome, contains an N-terminal c-Myb DNA binding motif necessary for cell viability but not for Prp19p association, evolutionarily conserved and homologous to S. pombe Cdc5p [Source:SGD;Acc:S000004826]


Gene families : OG_03_0001690 (OF) Phylogenetic Tree(s): OG0001690_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YMR213W
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AFR94021 No alias pre-mRNA-splicing factor CEF1;pre-mRNA splicing factor... 0.03 OF
AOA65410 No alias SANT/Myb domain 0.04 OF
CAG81249 No alias Myb-like DNA-binding domain 0.05 OF
CAK37972 No alias pre-mRNA splicing factor component 0.02 OF
CBF79492 No alias Pre-mRNA-splicing factor cef1 0.03 OF
EAA33398 No alias Pre-mRNA splicing factor component Cdc5p/Cef1 0.06 OF
EAL87645 No alias cell division control protein (Cdc5), putative 0.06 OF
EAU88285 No alias CDC5 0.03 OF
EED48746 No alias cell division control protein (Cdc5), putative 0.02 OF
EGR51735 No alias Myb-like DNA-binding domain 0.02 OF
ESU16436 No alias pre-mRNA-splicing factor cef-1 0.02 OF
KHC83685 No alias pre-mRNA-splicing factor CEF1;Myb-like DNA-binding domain 0.04 OF
POW00742 No alias Myb-like DNA-binding domain;Pre-mRNA splicing factor... 0.01 OF
SPAC644.12.1 No alias splicing factor, Prp19 complex subunit Cdc5... 0.05 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021786 Cdc5p/Cef1 349 412
No external refs found!