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  5. YBR198C

YBR198C


Description : Subunit (90 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification [Source:SGD;Acc:S000000402]


Gene families : OG_03_0002044 (OF) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YBR198C
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AFR98856 No alias transcription initiation factor TFIID subunit 5,... 0.04 OF
AGV14862 No alias transcription initiation factor TFIID subunit 5,... 0.04 OF
AOA68295 No alias WD domain, G-beta repeat 0.03 OF
CAK43699 No alias LisH 0.03 OF
CBF89788 No alias transcription initiation factor TFIID subunit, putative 0.02 OF
EAA32056 No alias WD40 repeat 0.03 OF
EAL88019 No alias transcription initiation factor TFIID subunit, putative 0.01 OF
EAU93159 No alias TFIID and SAGA subunit 0.01 OF
EGR46337 No alias WD40 repeat 0.04 OF
KHC71390 No alias transcription initiation factor TFIID subunit 5;LisH;"WD... 0.04 OF
MGG_06742T0 No alias Putative uncharacterized protein... 0.02 OF
SPBC15D4.14.1 No alias transcription factor TFIID complex subunit Taf5-like... 0.05 OF
SPCC5E4.03c.1 No alias SAGA complex subunit/TATA-binding protein associated... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007582 TFIID_NTD2 148 277
IPR006594 LisH 59 84
IPR001680 WD40_repeat 519 553
IPR001680 WD40_repeat 684 722
IPR001680 WD40_repeat 458 494
IPR001680 WD40_repeat 561 595
IPR001680 WD40_repeat 643 679
IPR001680 WD40_repeat 601 637
No external refs found!