YAL019W

Description : Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5' strand resection of DSBs; potential Cdc28p substrate [Source:SGD;Acc:S000000017]

Gene families : OG_03_0001629 (OF) Phylogenetic Tree(s): OG0001629_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YAL019W
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AFR99038	No alias	hypothetical protein;SNF2 family N-terminal...	0.05	OF
CAG78816	No alias	SNF2-related, N-terminal domain	0.03	OF
CAK37885	No alias	Helicase conserved C-terminal domain	0.03	OF
CBF83639	No alias	SNF2 family helicase/ATPase, putative	0.02	OF
EAA29079	No alias	SNF2-related, N-terminal domain	0.07	OF
EAL92736	No alias	SNF2 family helicase/ATPase, putative	0.03	OF
EGR50594	No alias	SNF2-related, N-terminal domain	0.03	OF
ESU06571	No alias	Helicase, C-terminal	0.07	OF
KHC70616	No alias	hypothetical protein;Helicase conserved C-terminal...	0.18	OF
MGG_09930T0	No alias	Chromodomain-helicase-DNA-binding protein 3...	0.03	OF
SPAC20G8.08c.1	No alias	SMARCAD1 family ATP-dependent DNA helicase Fft1...	0.06	OF
SPAC25A8.01c.1	No alias	SMARCAD1 family ATP-dependent DNA helicase Fft3...	0.05	OF
SPCC1235.05c.1	No alias	SMARCAD1 family ATP-dependent DNA helicase Fft2...	0.05	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	585	880
IPR001650	Helicase_C	950	1063

External Links

No external refs found!

YAL019W

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation