CAK42288

Description : Pumilio-family RNA binding repeat

Gene families : OG_03_0003471 (OF) Phylogenetic Tree(s): OG0003471_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CAK42288
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
CBF71045	No alias	mRNA binding protein Pumilio 2, putative	0.02	OF
EAL85609	No alias	mRNA binding protein Pumilio 2, putative	0.03	OF
EDN90679	No alias	Pumilio RNA-binding repeat	0.05	OF
MGG_04985T0	No alias	Putative uncharacterized protein...	0.05	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	531	564
IPR001313	Pumilio_RNA-bd_rpt	675	708
IPR001313	Pumilio_RNA-bd_rpt	602	632
IPR001313	Pumilio_RNA-bd_rpt	717	743
IPR001313	Pumilio_RNA-bd_rpt	639	671
IPR001313	Pumilio_RNA-bd_rpt	751	780
IPR001313	Pumilio_RNA-bd_rpt	793	812
IPR001313	Pumilio_RNA-bd_rpt	567	597

External Links

No external refs found!