1. Home
  2. Species
  3. Saccharomyces cerevisiae
  4. Sequence
  5. YLR397C

YLR397C


Description : ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; releases Rlp24p from purified pre-60S particles in vitro; target of the ribosomal biosynthesis inhibitor diazaborine; may be involved in degradation of aberrant mRNAs [Source:SGD;Acc:S000004389]


Gene families : OG_03_0000176 (OF) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YLR397C
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AFR96612 No alias AAA family ATPase;AAA+ lid domain;ATPase family... 0.11 OF
AOA68184 No alias AAA ATPase, AAA+ lid domain 0.03 OF
AOA69844 No alias ATPase, AAA-type, core 0.04 OF
CAG78513 No alias AAA ATPase, AAA+ lid domain 0.12 OF
CAG79218 No alias ATPase, AAA-type, core 0.1 OF
CAK41801 No alias AAA+ lid domain 0.03 OF
CAK45225 No alias ATPase family associated with various cellular activities (AAA) 0.08 OF
CBF87639 No alias AAA family ATPase/60S ribosome export protein Rix7, putative 0.14 OF
EAA27251 No alias ATPase, AAA-type, core 0.07 OF
EAA32995 No alias AAA ATPase, AAA+ lid domain 0.06 OF
EAL84628 No alias AAA family ATPase, putative 0.07 OF
EAL90250 No alias AAA family ATPase/60S ribosome export protein Rix7, putative 0.09 OF
EDN94326 No alias ATPase, AAA-type, core 0.1 OF
EDN98200 No alias ATPase, AAA-type, core 0.05 OF
ESU12279 No alias ATPase, AAA-type, core 0.07 OF
ESU17882 No alias AAA ATPase, AAA+ lid domain 0.07 OF
KHC70716 No alias AAA family ATPase;AAA+ lid domain;ATPase family... 0.08 OF
KHC75114 No alias ribosome biogenesis ATPase;AAA+ lid domain;ATPase family... 0.16 OF
MGG_13203T0 No alias ATPase [Source:UniProtKB/TrEMBL;Acc:G4N5K9] 0.07 OF
POW01776 No alias AAA ATPase, AAA+ lid domain;AAA ATPase, AAA+ lid... 0.02 OF
POW11465 No alias ATPase, AAA-type, core;ATPase, AAA-type, core;AAA... 0.02 OF
SPBC16E9.10c.1 No alias AAA family ATPase Rix7 (predicted)... 0.1 OF

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 442 474
IPR041569 AAA_lid_3 707 752
IPR003959 ATPase_AAA_core 553 682
IPR003959 ATPase_AAA_core 282 412
No external refs found!