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  5. YLR208W

YLR208W


Description : Structural component of 3 complexes; subunit of the Nup84p nuclear pore subcomplex that contributes to nucleocytoplasmic transport and NPC biogenesis; subunit of the COPII vesicle coat required for ER-to-Golgi transport; subunit of SEACAT, a subcomplex of the coatomer-related, vacuolar-associated SEA complex, that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p, thereby resulting in activation of TORC1 signaling; human SEC13 homolog [Source:SGD;Acc:S000004198]


Gene families : OG_03_0000461 (OF) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YLR208W
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AFR96926 No alias protein transporter SEC13;WD domain, G-beta repeat 0.02 OF
AOA65862 No alias WD domain, G-beta repeat 0.06 OF
CAG78850 No alias WD40 repeat 0.02 OF
CAG83234 No alias WD40 repeat 0.02 OF
CAK38491 No alias WD domain, G-beta repeat 0.04 OF
CBF77777 No alias Protein transport protein sec13 0.04 OF
EGR46721 No alias WD40 repeat 0.02 OF
EGR51732 No alias WD40 repeat 0.04 OF
ESU15819 No alias transporter SEC13 0.06 OF
KHC78908 No alias protein transporter SEC13;"WD domain, G-beta repeat" 0.05 OF
SPAC15F9.02.1 No alias Seh1-associated complex subunit Seh1... 0.05 OF
SPBC215.15.1 No alias COPII-coated vesicle component Sec13... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 198 234
IPR001680 WD40_repeat 45 83
No external refs found!