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  5. YBR142W

YBR142W


Description : Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits [Source:SGD;Acc:S000000346]


Gene families : OG_03_0002128 (OF) Phylogenetic Tree(s): OG0002128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YBR142W
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AFR98787 No alias ATP-dependent RNA helicase MAK5;Helicase conserved... 0.23 OF
AOA70176 No alias Helicase, C-terminal 0.28 OF
CAG83693 No alias Helicase, C-terminal 0.35 OF
CAK96962 No alias Helicase conserved C-terminal domain 0.41 OF
CBF85492 No alias ATP-dependent RNA helicase mak5 0.3 OF
EAA28420 No alias DEAD/DEAH box helicase domain 0.08 OF
EAL88741 No alias ATP dependent RNA helicase, putative 0.39 OF
EAU89326 No alias ATP-dependent RNA helicase MAK5 0.04 OF
EDN99610 No alias DEAD/DEAH box helicase domain 0.28 OF
EED48650 No alias ATP dependent RNA helicase, putative 0.05 OF
EGR44644 No alias Helicase, C-terminal 0.14 OF
EJF56229 No alias Helicase conserved C-terminal domain 0.05 OF
MGG_00560T0 No alias ATP-dependent RNA helicase MAK5... 0.3 OF
POW01405 No alias Helicase, C-terminal;DEAD/DEAH box helicase domain 0.1 OF
SPBC4F6.07c.1 No alias ATP-dependent RNA helicase Mak5 (predicted)... 0.26 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 195 382
IPR001650 Helicase_C 453 574
No external refs found!