CAK38921

Description : ABC transporter transmembrane region

Gene families : OG_03_0000037 (OF) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CAK38921
Cluster	HCCA: Cluster_101

Target	Alias	Description	ECC score	Gene Family Method
AOA66031	No alias	ABC transporter type 1, transmembrane domain	0.03	OF
CAG78460	No alias	ABC transporter-like	0.02	OF
CAG83910	No alias	ABC transporter-like	0.03	OF
CAK38634	No alias	ABC transporter	0.02	OF
CBF74724	No alias	conserved hypothetical protein	0.03	OF
CBF86663	No alias	ATP-binding cassette multidrug transport protein ATRC	0.04	OF
EAA29359	No alias	ABC transporter-like	0.05	OF
EAL85730	No alias	ABC multidrug transporter, putative	0.06	OF
EAL89381	No alias	ABC multidrug transporter, putative	0.04	OF
EDN98992	No alias	Peptidase M20, dimerisation domain	0.01	OF
EGR48468	No alias	ABC transporter-like	0.02	OF
EGR52477	No alias	ABC transporter-like	0.03	OF
MGG_05595T0	No alias	Spermidine/putrescine import ATP-binding protein potA...	0.03	OF
MGG_08970T0	No alias	Leptomycin B resistance protein pmd1...	0.05	OF
SPCC663.03.1	No alias	leptomycin transmembrane transporter Pmd1...	0.02	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	62	338
IPR011527	ABC1_TM_dom	724	997
IPR003439	ABC_transporter-like	408	563
IPR003439	ABC_transporter-like	1070	1222

External Links

No external refs found!

CAK38921

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation