Description : Component of commitment complex; which defines first step in splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000004106]

Gene families : OG_03_0003688 (OF) Phylogenetic Tree(s): OG0003688_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: YLR116W
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
CAG78384 No alias Zinc finger, CCHC-type 0.04 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032570 SF1-HH 33 143
IPR004088 KH_dom_type_1 162 191
IPR001878 Znf_CCHC 298 313
No external refs found!