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YLR115W


Description : Subunit of the mRNA cleavage and polyadenlylation factor (CPF); required for pre-mRNA cleavage, polyadenylation and poly(A) site recognition, 43% similarity with the mammalian CPSF-100 protein. [Source:SGD;Acc:S000004105]


Gene families : OG_03_0003288 (OF) Phylogenetic Tree(s): OG0003288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YLR115W
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AOA67533 No alias Cleavage and polyadenylation specificity factor 2, C-terminal 0.07 OF
CAG82492 No alias Beta-Casp domain 0.02 OF
CAK42833 No alias Beta-Casp domain 0.04 OF
CBF83440 No alias cleavage and polyadenylylation specificity factor, putative 0.06 OF
EAL92609 No alias cleavage and polyadenylylation specificity factor, putative 0.07 OF
EAU84389 No alias cleavage and polyadenylation specificity factor subunit 0.03 OF
EDN95272 No alias Metallo-beta-lactamase 0.05 OF
EGR48950 No alias Zn-dependent metallo-hydrolase, RNA specificity domain 0.08 OF
ESA41824 No alias Metallo-beta-lactamase 0.1 OF
ESA41825 No alias Metallo-beta-lactamase 0.1 OF
ESU17985 No alias Metallo-beta-lactamase 0.05 OF
KHC78900 No alias cleavage and polyadenylation specificity factor subunit... 0.09 OF
MGG_06570T0 No alias Putative uncharacterized protein... 0.02 OF
SPBC1709.15c.1 No alias cleavage factor two Cft2/polyadenylation factor CPSF-73... 0.04 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 20 211
IPR025069 Cpsf2_C 761 856
No external refs found!