YLR086W

Description : Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for tRNA gene clustering at the nucleolus; potential Cdc28p substrate [Source:SGD;Acc:S000004076]

Gene families : OG_03_0001874 (OF) Phylogenetic Tree(s): OG0001874_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YLR086W
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AFR95373	No alias	hypothetical protein;RecF/RecN/SMC N terminal domain;SMC...	0.07	OF
AOA68070	No alias	RecF/RecN/SMC, N-terminal	0.05	OF
CAG82320	No alias	RecF/RecN/SMC, N-terminal	0.05	OF
CAK39518	No alias	SMC proteins Flexible Hinge Domain	0.03	OF
CBF77179	No alias	nuclear condensin complex subunit Smc4, putative	0.06	OF
EAA29331	No alias	RecF/RecN/SMC, N-terminal	0.08	OF
EAL87314	No alias	nuclear condensin complex subunit Smc4, putative	0.04	OF
EDN95150	No alias	RecF/RecN/SMC, N-terminal	0.03	OF
EFI28737	No alias	SMCs flexible hingeRecF/RecN/SMC, N-terminal	0.06	OF
EFI28738	No alias	smc4 chromosome structural maintenance 4-like protein	0.06	OF
EGR45216	No alias	RecF/RecN/SMC, N-terminal	0.07	OF
ESU17808	No alias	SMCs flexible hinge	0.08	OF
KHC74945	No alias	hypothetical protein;SMC proteins Flexible Hinge...	0.11	OF
MGG_03378T0	No alias	Nuclear condensin complex subunit Smc4...	0.05	OF
POV99193	No alias	SMCs flexible hinge;RecF/RecN/SMC, N-terminal	0.07	OF
SPBC146.03c.1	No alias	condensin complex SMC subunit Smc4...	0.06	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005694	chromosome	IEA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0051276	chromosome organization	IEA	Interproscan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010935	SMC_hinge	686	799
IPR003395	RecF/RecN/SMC_N	155	1405

External Links

No external refs found!

YLR086W

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation