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  5. YLL011W

YLL011W


Description : Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene [Source:SGD;Acc:S000003934]


Gene families : OG_03_0003373 (OF) Phylogenetic Tree(s): OG0003373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YLL011W
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AGV15330 No alias WD repeat and SOF domain-containing protein 1;Sof1-like... 0.03 OF
AOA68492 No alias WD domain, G-beta repeat 0.28 OF
CAG81001 No alias WD40 repeat 0.15 OF
CAK43306 No alias WD domain, G-beta repeat 0.35 OF
CBF74442 No alias small nucleolar ribonucleoprotein complex subunit 0.12 OF
EAA27270 No alias WD40 repeat 0.16 OF
EAL88340 No alias small nucleolar ribonucleoprotein complex subunit... 0.25 OF
EAU83940 No alias snoRNA binding protein 0.04 OF
EDO03263 No alias Sof1-like protein 0.14 OF
EGR47937 No alias WD40 repeat 0.06 OF
EJF56705 No alias WD domain, G-beta repeat 0.08 OF
ESU06767 No alias WD40 repeat 0.25 OF
KHC80005 No alias WD repeat and SOF domain-containing protein 1;Sof1-like... 0.31 OF
MGG_03210T0 No alias U3 small nucleolar RNA associated protein... 0.2 OF
POW01164 No alias WD40 repeat;WD40 repeat;Sof1-like protein;Translation... 0.04 OF
SPBC1A4.07c.1 No alias U3 snoRNP-associated protein Sof1 (predicted)... 0.2 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007287 Sof1 377 461
IPR001680 WD40_repeat 105 149
IPR001680 WD40_repeat 350 375
IPR001680 WD40_repeat 65 96
IPR001680 WD40_repeat 298 332
No external refs found!