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  5. CBF88817

CBF88817


Description : ABC transporter protein


Gene families : OG_03_0000022 (OF) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBF88817
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
CAG79546 No alias ABC-2 type transporter 0.01 OF
CAG83074 No alias ABC-2 type transporter 0.01 OF
CAK36926 No alias ABC-transporter N-terminal 0.02 OF
CBF79672 No alias ABC transporter protein 0.04 OF
CBF87998 No alias ABC multidrug transporter 0.06 OF
EAA28834 No alias CDR ABC transporter 0.05 OF
EAA29293 No alias CDR ABC transporter 0.05 OF
EAU92343 No alias ABC-transporter 0.02 OF
EDN98640 No alias ABC transporter-like 0.01 OF
EDO01615 No alias CDR ABC transporter 0.02 OF
EFI27571 No alias ATP binding cassette transporter 0.01 OF
EGR44624 No alias ABC transporter-like 0.01 OF
EGR49236 No alias ABC-2 type transporter 0.03 OF
ESU09289 No alias ABC-2 type transporter 0.01 OF
ESU13641 No alias ABC transporter-like 0.02 OF
ESU18393 No alias ABC transporter-like 0.01 OF
POW01968 No alias ABC-2 type transporter;ABC-2 type transporter;ABC-2 type... 0.04 OF

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029481 ABC_trans_N 84 169
IPR010929 PDR_CDR_ABC 742 824
IPR013525 ABC_2_trans 1180 1394
IPR013525 ABC_2_trans 518 728
IPR003439 ABC_transporter-like 193 352
IPR003439 ABC_transporter-like 878 1029
No external refs found!