CBF84797

Description : hypothetical U5 snRNP component

Gene families : OG_03_0000282 (OF) Phylogenetic Tree(s): OG0000282_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: CBF84797
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
AFR95055	No alias	U5 small nuclear ribonucleoprotein component;Elongation...	0.03	OF
AOA67359	No alias	Elongation Factor G, domain II	0.02	OF
AOA67611	No alias	Elongation factor EFG, domain V-like	0.05	OF
CAG83532	No alias	Transcription factor, GTP-binding domain	0.04	OF
CAK47116	No alias	Elongation Factor G, domain II	0.08	OF
CAK47698	No alias	Elongation factor Tu GTP binding domain	0.05	OF
EAA36467	No alias	Elongation factor EFG, domain V-like	0.08	OF
EAL85168	No alias	U5 snRNP component Snu114, putative	0.07	OF
EAL93648	No alias	translation elongation factor EF-2 subunit, putative	0.03	OF
EDN95947	No alias	Translation elongation factor EFG/EF2, domain IV	0.06	OF
EDN96415	No alias	Elongation factor EFG, domain V-like	0.05	OF
EFI28717	No alias	u5 small nuclear ribonucleoprotein component	0.04	OF
EGR47270	No alias	Transcription factor, GTP-binding domain	0.1	OF
ESU15880	No alias	U5 small nuclear ribonucleoprotein component	0.09	OF
MGG_01742T0	No alias	Elongation factor 2 [Source:UniProtKB/TrEMBL;Acc:G4MVB0]	0.02	OF
MGG_13500T0	No alias	U5 small nuclear ribonucleoprotein component...	0.06	OF
POW17228	No alias	Transcription factor, GTP-binding domain;Translation...	0.02	OF
SPBC215.12.1	No alias	U5 snRNP GTPase subunit Cwf10 [Source:PomBase;Acc:SPBC215.12]	0.04	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000640	EFG_V-like	842	930
IPR031950	EFTUD2_N	2	115
IPR041095	EFG_II	601	664
IPR000795	TF_GTP-bd_dom	133	451
IPR005517	Transl_elong_EFG/EF2_IV	720	840

External Links

No external refs found!