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  5. YKL068W

YKL068W


Description : FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier and is involved in gene tethering at the nuclear periphery; NUP100 has a paralog, NUP116, that arose from the whole genome duplication [Source:SGD;Acc:S000001551]


Gene families : OG_03_0000675 (OF) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YKL068W
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AFR93115 No alias nuclear pore complex protein Nup98-Nup96;Nucleoporin FG... 0.03 OF
CAG81152 No alias Peptidase S59, nucleoporin 0.02 OF
CAK38825 No alias Nuclear protein 96 0.04 OF
CBF81523 No alias Putative uncharacterized proteinSONB 0.02 OF
EAA31174 No alias Peptidase S59, nucleoporin 0.05 OF
EAL89683 No alias nucleoporin SONB, putative 0.02 OF
EED84557 No alias Nuclear protein 96 0.02 OF
EJF62232 No alias Nucleoporin autopeptidase 0.02 OF

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0006913 nucleocytoplasmic transport IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 815 955
IPR025574 Nucleoporin_FG_rpt 429 509
IPR025574 Nucleoporin_FG_rpt 287 373
IPR025574 Nucleoporin_FG_rpt 6 75
IPR025574 Nucleoporin_FG_rpt 132 210
No external refs found!