YBR080C

Description : AAA ATPase and SNARE disassembly chaperone; required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, autophagy, and protein secretion; releases Sec17p from SNAP complexes; has similarity to mammalian N-ethylmaleimide-sensitive factor (NSF) [Source:SGD;Acc:S000000284]

Gene families : OG_03_0002664 (OF) Phylogenetic Tree(s): OG0002664_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YBR080C
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AFR95885	No alias	vesicle-fusing ATPase;Cell division protein 48 (CDC48),...	0.04	OF
AOA69262	No alias	CDC48, domain 2	0.06	OF
CAG80146	No alias	ATPase, AAA-type, core	0.08	OF
CAK37808	No alias	secretory gene nsfA-Aspergillus niger	0.03	OF
CBF83412	No alias	vesicular fusion ATPase, putative	0.07	OF
EAA27598	No alias	AAA ATPase, AAA+ lid domain	0.06	OF
EAL92332	No alias	vesicular fusion ATPase, putative	0.03	OF
EAU84436	No alias	vesicular-fusion protein sec18	0.06	OF
EDN96019	No alias	CDC48, domain 2	0.03	OF
EGR48754	No alias	ATPase, AAA-type, core	0.06	OF
EJF62284	No alias	ATPase family associated with various cellular activities (AAA)	0.03	OF
KHC84087	No alias	vesicular-fusion protein SEC18;"Cell division protein 48...	0.06	OF
MGG_02418T0	No alias	Vesicular-fusion protein SEC18...	0.03	OF
POV97662	No alias	AAA ATPase, AAA+ lid domain;CDC48, domain 2;ATPase,...	0.03	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004201	Cdc48_dom2	134	203
IPR041569	AAA_lid_3	444	478
IPR003959	ATPase_AAA_core	277	417
IPR003959	ATPase_AAA_core	560	689
IPR003338	CDC4_N-term_subdom	29	101

External Links

No external refs found!

YBR080C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation