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  5. YJL124C

YJL124C


Description : Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) involved in degradation of cytoplasmic mRNAs; also enters the nucleus and positively regulates transcription initiation; unlike most Sm-like proteins, Lsm1p requires both its SM-domain and C-terminal domain for RNA-binding; binds to mRNAs under glucose starvation, most often in the 3' UTR; forms cytoplasmic foci upon DNA replication stress [Source:SGD;Acc:S000003660]


Gene families : OG_03_0002104 (OF) Phylogenetic Tree(s): OG0002104_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: YJL124C
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AFR94245 No alias U6 snRNA-associated Sm-like protein LSm1;LSM domain 0.02 OF
EAA27276 No alias LSM domain, eukaryotic/archaea-type 0.02 OF
EAU93018 No alias LSM domain, eukaryotic/archaea-type 0.02 OF
ESU17890 No alias LSM domain, eukaryotic/archaea-type 0.03 OF
KHC69643 No alias U6 snRNA-associated Sm-like protein LSm1;LSM domain 0.04 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 48 113
No external refs found!