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  5. YJL080C

YJL080C


Description : Essential RNA-binding G protein effector of mating response pathway; ligand-activated RNA-binding protein that delivers RNAs involved in polarization and perpetualizing mating signal to shmoo tip during pheromone signaling; Scp160p-mediated RNA trafficking essential for chemotropism and successful mating; mainly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins [Source:SGD;Acc:S000003616]


Gene families : OG_03_0001994 (OF) Phylogenetic Tree(s): OG0001994_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: YJL080C
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AFR97058 No alias hypothetical protein;KH domain 0.06 OF
AOA66430 No alias K Homology domain, type 1 0.13 OF
CAG83444 No alias K Homology domain, type 1 0.08 OF
CAK40668 No alias KH domain 0.06 OF
CBF86115 No alias RNA binding effector protein Scp160, putative 0.05 OF
EAL87564 No alias RNA binding effector protein Scp160, putative 0.04 OF
EAU91486 No alias SCP160 protein 0.06 OF
EED78149 No alias K Homology domain, type 1 0.01 OF
EGR51456 No alias K Homology domain, type 1 0.11 OF
ESA42238 No alias K Homology domain, type 1 0.07 OF
ESA42239 No alias K Homology domain, type 1 0.06 OF
KHC83923 No alias hypothetical protein;KH domain 0.16 OF
MGG_06496T0 No alias Putative uncharacterized protein... 0.1 OF
POW15313 No alias K Homology domain, type 1 0.01 OF
SPCC550.14.1 No alias vigilin (predicted) [Source:PomBase;Acc:SPCC550.14] 0.12 OF

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 863 930
IPR004088 KH_dom_type_1 941 1002
IPR004088 KH_dom_type_1 786 852
IPR004088 KH_dom_type_1 1166 1217
IPR004088 KH_dom_type_1 181 250
IPR004088 KH_dom_type_1 714 772
IPR004088 KH_dom_type_1 638 702
No external refs found!