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  5. CBF74845

CBF74845


Description : mRNA splicing factor RNA helicase


Gene families : OG_03_0000045 (OF) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: CBF74845
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AFR93170 No alias ATP-dependent RNA helicase DDX35;AAA domain;Helicase... 0.02 OF
AFR97936 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OF
AOA65445 No alias Helicase-associated domain 0.04 OF
AOA66220 No alias Helicase, C-terminal 0.04 OF
CAG80826 No alias Domain of unknown function DUF1605 0.04 OF
CAG83003 No alias Helicase, C-terminal 0.03 OF
EAA35877 No alias Helicase, C-terminal 0.03 OF
EAL88094 No alias mRNA splicing factor RNA helicase (Prp16), putative 0.05 OF
EAL91525 No alias RNA helicase-like splicing factor (HRH1), putative 0.04 OF
EAL93068 No alias mRNA splicing factor RNA helicase (Cdc28), putative 0.07 OF
EAU85955 No alias pre-mRNA splicing factor 0.04 OF
EAU92580 No alias ATP-dependent RNA helicase DHX8 0.03 OF
EAU93276 No alias pre-mRNA splicing factor 0.03 OF
EDN95366 No alias Helicase, C-terminal 0.02 OF
EDN99006 No alias Helicase-associated domain 0.05 OF
EED80851 No alias S1 domain 0.04 OF
EGR45053 No alias Helicase-associated domain 0.06 OF
EGR50716 No alias Helicase, C-terminal 0.1 OF
EJF55621 No alias Helicase conserved C-terminal domain 0.06 OF
ESU05632 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 0.03 OF
ESU10905 No alias ATP-dependent RNA helicase DHX8 0.06 OF
ESU17099 No alias Helicase, C-terminal 0.06 OF
KHC71219 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.06 OF
KHC75427 No alias ATP-dependent RNA helicase DHX8/PRP22;Helicase... 0.06 OF
MGG_02518T0 No alias ATP-dependent RNA helicase DHX8... 0.02 OF
MGG_03893T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OF
MGG_07501T0 No alias ATP-dependent RNA helicase DHX8... 0.07 OF
MGG_08807T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OF
POW03903 No alias Domain of unknown function DUF1605 0.02 OF
POW10235 No alias Domain of unknown function DUF1605;Helicase,... 0.05 OF
SPAC10F6.02c.1 No alias ATP-dependent RNA helicase Prp22... 0.06 OF
SPAC20H4.09.1 No alias ATP-dependent RNA helicase, spliceosomal (predicted)... 0.03 OF
SPBC1711.17.1 No alias ATP-dependent RNA helicase Prp16 [Source:PomBase;Acc:SPBC1711.17] 0.07 OF
SPBC19C2.01.1 No alias ATP-dependent RNA helicase Cdc28 [Source:PomBase;Acc:SPBC19C2.01] 0.04 OF
YER013W No alias DEAH-box RNA-dependent ATPase/ATP-dependent RNA... 0.1 OF
YKR086W No alias DEAH-box RNA helicase involved in second catalytic step... 0.05 OF
YNR011C No alias RNA-dependent DExD/H-box ATPase; required for activation... 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 582 668
IPR001650 Helicase_C 389 517
IPR011709 DUF1605 726 803
IPR011545 DEAD/DEAH_box_helicase_dom 197 346
No external refs found!