Description : mRNA-binding protein of the PUF family; binds to specific mRNAs, often in the 3' UTR; has broad specificity and binds to more than 1000 mRNAs (16% of the transcriptome); recruits the CCR4-NOT deadenylase complex to mRNAs along with Dhh1p and Dcp1p to promote deadenylation, decapping, and decay; also interacts with the Caf20p translational initiation repressor, affecting its mRNA target specificity [Source:SGD;Acc:S000003146]
Gene families : OG_03_0000635 (OF) Phylogenetic Tree(s): OG0000635_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: YGL178W | |
Cluster | HCCA: Cluster_18 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
CAG79369 | No alias | Pumilio RNA-binding repeat | 0.02 | OF | |
CAK43737 | No alias | Pumilio-family RNA binding repeat | 0.02 | OF | |
CAK43738 | No alias | No description available | 0.02 | OF | |
CBF89730 | No alias | RNA-binding protein, putative | 0.02 | OF | |
EGR48068 | No alias | No description available | 0.03 | OF | |
KHC80022 | No alias | hypothetical protein;Pumilio-family RNA binding repeat | 0.03 | OF | |
SPAC6G9.14.1 | No alias | pumilio family RNA-binding protein Puf4 (predicted)... | 0.03 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |