EAL86928


Description : nonsense-mediated mRNA decay factor (Upf2), putative


Gene families : OG_03_0002056 (OF) Phylogenetic Tree(s): OG0002056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EAL86928
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AOA69880 No alias MIF4G-like, type 3 0.03 OF
CAG79960 No alias MIF4G-like, type 3 0.09 OF
CAK39364 No alias MIF4G domain 0.13 OF
CBF71264 No alias nonsense-mediated mRNA decay factor 0.11 OF
EAA32521 No alias Up-frameshift suppressor 2, C-terminal 0.04 OF
EDN96959 No alias Up-frameshift suppressor 2, C-terminal 0.06 OF
EED83070 No alias No description available 0.02 OF
EGR44257 No alias MIF4G-like, type 3 0.06 OF
EJF60400 No alias Up-frameshift suppressor 2 0.04 OF
KHC81414 No alias hypothetical protein;MIF4G domain;Up-frameshift suppressor 2 0.1 OF
MGG_06063T0 No alias Nonsense-mediated mRNA decay factor... 0.08 OF
POW01528 No alias MIF4G-like, type 3;MIF4G-like, type 3;Up-frameshift... 0.04 OF
SPAC19A8.08.1 No alias nonsense-mediated decay protein Upf2... 0.12 OF
YHR077C No alias Protein involved in the nonsense-mediated mRNA decay... 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 701 910
IPR003890 MIF4G-like_typ-3 502 676
IPR007193 Upf2/Nmd2_C 995 1118
No external refs found!