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EAL85962


Description : PHD transcription factor (Rum1), putative


Gene families : OG_03_0000821 (OF) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EAL85962
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AOA67945 No alias JmjC domain 0.1 OF
CAG82221 No alias ARID DNA-binding domain 0.05 OF
EAU84425 No alias RUM1 0.03 OF
EED77799 No alias JmjC domain 0.02 OF
EGR49606 No alias JmjN domain 0.05 OF
EJF62291 No alias ARID/BRIGHT DNA binding domain 0.04 OF
ESU11880 No alias Lysine-specific demethylase-like domain 0.14 OF
KHC83343 No alias hypothetical protein;PLU-1-like protein;PHD-finger;"JmjC... 0.1 OF
MGG_04878T0 No alias Lid2 complex component lid2 [Source:UniProtKB/TrEMBL;Acc:G4N2P7] 0.05 OF
POW02724 No alias JmjN domain;JmjC domain;Zinc finger, C5HC2-type;Zinc... 0.05 OF
SPAC343.11c.1 No alias Swr1 complex subunit Chk1 [Source:PomBase;Acc:SPAC343.11c] 0.11 OF
SPBP19A11.06.1 No alias Lid2 complex subunit, predicted histone demethylase Lid2... 0.07 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 484 529
IPR019787 Znf_PHD-finger 1356 1401
IPR001606 ARID_dom 167 252
IPR013637 Lys_sp_deMease-like_dom 952 1296
IPR003347 JmjC_dom 656 772
IPR003349 JmjN 76 109
IPR004198 Znf_C5HC2 880 938
No external refs found!