Description : Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors [Source:SGD;Acc:S000002982]
Gene families : OG_03_0000635 (OF) Phylogenetic Tree(s): OG0000635_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: YGL014W | |
Cluster | HCCA: Cluster_18 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
CAK43737 | No alias | Pumilio-family RNA binding repeat | 0.03 | OF | |
CAK43738 | No alias | No description available | 0.03 | OF | |
CBF89730 | No alias | RNA-binding protein, putative | 0.03 | OF | |
EDO01277 | No alias | Pumilio RNA-binding repeat | 0.02 | OF | |
EJF58468 | No alias | Pumilio-family RNA binding repeat | 0.02 | OF | |
KHC80022 | No alias | hypothetical protein;Pumilio-family RNA binding repeat | 0.05 | OF | |
MGG_14563T0 | No alias | RNA-binding protein [Source:UniProtKB/TrEMBL;Acc:G4MNW4] | 0.02 | OF | |
SPAC6G9.14.1 | No alias | pumilio family RNA-binding protein Puf4 (predicted)... | 0.04 | OF |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001313 | Pumilio_RNA-bd_rpt | 673 | 706 |
IPR001313 | Pumilio_RNA-bd_rpt | 600 | 628 |
IPR001313 | Pumilio_RNA-bd_rpt | 827 | 855 |
IPR001313 | Pumilio_RNA-bd_rpt | 785 | 810 |
IPR001313 | Pumilio_RNA-bd_rpt | 565 | 596 |
IPR001313 | Pumilio_RNA-bd_rpt | 749 | 777 |
IPR001313 | Pumilio_RNA-bd_rpt | 709 | 741 |
IPR001313 | Pumilio_RNA-bd_rpt | 637 | 664 |
No external refs found! |