YFL002C

Description : Putative ATP-dependent RNA helicase; nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients [Source:SGD;Acc:S000001894]

Gene families : OG_03_0001713 (OF) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: YFL002C
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AFR99058	No alias	ATP-dependent rRNA helicase SPB4;DEAD/DEAH box...	0.18	OF
AOA66571	No alias	DEAD/DEAH box helicase domain	0.06	OF
CAG78378	No alias	Helicase, C-terminal	0.34	OF
CAK44325	No alias	Domain of unknown function (DUF4217)	0.27	OF
CBF83255	No alias	ATP-dependent rRNA helicase spb4	0.14	OF
EAA27591	No alias	Domain of unknown function DUF4217	0.24	OF
EAL92256	No alias	DEAD/DEAH box helicase (Sbp4), putative	0.29	OF
EAU84793	No alias	ATP-dependent rRNA helicase spb4	0.02	OF
EDN96015	No alias	DEAD/DEAH box helicase domain	0.05	OF
EED54803	No alias	DEAD/DEAH box helicase (Sbp4), putative	0.07	OF
EGR48591	No alias	Domain of unknown function DUF4217	0.24	OF
ESU17862	No alias	ATP-dependent rRNA helicase SPB4	0.26	OF
KHC75063	No alias	ATP-dependent rRNA helicase SPB41;Helicase conserved...	0.13	OF
POV95204	No alias	Domain of unknown function DUF4217;DEAD/DEAH box...	0.03	OF
SPBC24C6.02.1	No alias	ATP-dependent RNA helicase Spb4 (predicted)...	0.23	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	31	207
IPR025313	DUF4217	410	467
IPR001650	Helicase_C	247	365

External Links

No external refs found!

YFL002C

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation