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  5. YER165W

YER165W


Description : Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex [Source:SGD;Acc:S000000967]


Gene families : OG_03_0003206 (OF) Phylogenetic Tree(s): OG0003206_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: YER165W
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AFR97161 No alias polyadenylate-binding protein, cytoplasmic and... 0.06 OF
AOA67869 No alias RNA recognition motif domain 0.11 OF
CAG81584 No alias Polyadenylate-binding protein/Hyperplastic disc protein 0.12 OF
CAK43671 No alias Poly-adenylate binding protein, unique domain 0.08 OF
CBF74916 No alias Polyadenylate-binding protein, cytoplasmic and nuclear 0.05 OF
EAA31189 No alias RNA recognition motif domain 0.05 OF
EAL88129 No alias polyadenylate-binding protein 0.06 OF
EAU88497 No alias polyadenylate-binding protein 0.02 OF
EDN90963 No alias Polyadenylate-binding protein/Hyperplastic disc protein 0.09 OF
EGR47358 No alias RNA recognition motif domain 0.05 OF
KHC83118 No alias polyadenylate-binding protein, cytoplasmic and... 0.16 OF
SPAC57A7.04c.1 No alias mRNA export shuttling protein [Source:PomBase;Acc:SPAC57A7.04c] 0.06 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 324 392
IPR000504 RRM_dom 221 289
IPR000504 RRM_dom 128 196
IPR000504 RRM_dom 40 109
IPR002004 PABP_HYD 496 561
No external refs found!