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EDO03136


Description : HTH CenpB-type DNA-binding domain


Gene families : OG_03_0000046 (OF) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: EDO03136
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
CBF80591 No alias conserved hypothetical protein 0.02 OF
EDN93356 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDN93663 No alias HTH CenpB-type DNA-binding domain 0.03 OF
EDN95836 No alias DDE superfamily endonuclease domain 0.04 OF
EDN97160 No alias HTH CenpB-type DNA-binding domain 0.03 OF
EDN97523 No alias DNA binding HTH domain, Psq-type 0.08 OF
EDN97538 No alias DDE superfamily endonuclease domain 0.04 OF
EDN98259 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDN98961 No alias HTH CenpB-type DNA-binding domain 0.03 OF
EDN99830 No alias DNA binding HTH domain, Psq-type 0.03 OF
EDO00059 No alias DDE superfamily endonuclease domain 0.02 OF
EDO00352 No alias HTH CenpB-type DNA-binding domain 0.05 OF
EDO01013 No alias DNA binding HTH domain, Psq-type 0.05 OF
EDO03174 No alias No description available 0.02 OF
EDO03396 No alias DNA binding HTH domain, Psq-type 0.03 OF
EDO03793 No alias DDE superfamily endonuclease domain 0.04 OF
EDO04596 No alias HTH CenpB-type DNA-binding domain 0.02 OF
EED85264 No alias DDE superfamily endonuclease domain 0.01 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
ECC Pair graph <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/4067">IPR004875</a></td> <td class="col-xs-5">DDE_SF_endonuclease_dom</td> <td class="col-xs-2">137</td> <td class="col-xs-2">213</td> </tr> <tr> <td class="col-xs-3"><a href="/interpro/view/5636">IPR006600</a></td> <td class="col-xs-5">HTH_CenpB_DNA-bd_dom</td> <td class="col-xs-2">3</td> <td class="col-xs-2">62</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">fungi.guru</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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