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EDO01646


Description : DNA binding HTH domain, Psq-type


Gene families : OG_03_0000046 (OF) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDO01646
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
CBF80591 No alias conserved hypothetical protein 0.04 OF
EDN93356 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDN95836 No alias DDE superfamily endonuclease domain 0.04 OF
EDN97523 No alias DNA binding HTH domain, Psq-type 0.08 OF
EDN97538 No alias DDE superfamily endonuclease domain 0.04 OF
EDN98259 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDN99830 No alias DNA binding HTH domain, Psq-type 0.04 OF
EDN99970 No alias DDE superfamily endonuclease domain 0.03 OF
EDO00352 No alias HTH CenpB-type DNA-binding domain 0.06 OF
EDO01013 No alias DNA binding HTH domain, Psq-type 0.06 OF
EDO03793 No alias DDE superfamily endonuclease domain 0.04 OF
ESU15226 No alias DDE superfamily endonuclease domain 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004875 DDE_SF_endonuclease_dom 198 364
IPR006600 HTH_CenpB_DNA-bd_dom 61 119
IPR007889 HTH_Psq 7 45
No external refs found!