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  5. EDN98254

EDN98254


Description : ABC transporter type 1, transmembrane domain


Gene families : OG_03_0000167 (OF) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDN98254
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
CAK38280 No alias ABC transporter transmembrane region 0.02 OF
CAK42759 No alias ABC transporter transmembrane region 0.02 OF
CAK43810 No alias ABC transporter 0.04 OF
CAK45840 No alias ABC transporter transmembrane region 0.02 OF
CAK45972 No alias ABC transporter transmembrane region 0.04 OF
CAK45976 No alias ABC transporter 0.08 OF
CBF73441 No alias ABC transporter 0.05 OF
CBF73982 No alias ABC multidrug transporter 0.04 OF
CBF80212 No alias ABC transporter 0.03 OF
EED48405 No alias ATP-binding cassette transporter, putative 0.05 OF
EED54325 No alias ABC transporter, putative 0.02 OF
EGR49492 No alias ABC transporter-like 0.02 OF
EGR51686 No alias ABC transporter-like 0.03 OF
EGR53020 No alias ABC transporter-like 0.04 OF
ESU05150 No alias ABC transporter type 1, transmembrane domain 0.03 OF
ESU07534 No alias ABC transporter type 1, transmembrane domain 0.02 OF
ESU12195 No alias ABC transporter type 1, transmembrane domain 0.04 OF
ESU15058 No alias ABC transporter-like 0.02 OF
ESU17283 No alias ABC transporter-like 0.02 OF

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1019 1092
IPR003439 ABC_transporter-like 416 548
IPR011527 ABC1_TM_dom 689 941
No external refs found!