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EDN96551


Description : ARID DNA-binding domain


Gene families : OG_03_0000821 (OF) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDN96551
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AOA67945 No alias JmjC domain 0.02 OF
AOA68069 No alias JmjN domain 0.03 OF
CAG83135 No alias JmjC domain 0.03 OF
CBF74118 No alias PHD transcription factor 0.04 OF
EAA32368 No alias Lysine-specific demethylase-like domain 0.02 OF
EJF62291 No alias ARID/BRIGHT DNA binding domain 0.02 OF
ESU11880 No alias Lysine-specific demethylase-like domain 0.03 OF
MGG_04878T0 No alias Lid2 complex component lid2 [Source:UniProtKB/TrEMBL;Acc:G4N2P7] 0.03 OF
SPAC343.11c.1 No alias Swr1 complex subunit Chk1 [Source:PomBase;Acc:SPAC343.11c] 0.02 OF

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003347 JmjC_dom 646 762
IPR019787 Znf_PHD-finger 474 519
IPR019787 Znf_PHD-finger 1341 1386
IPR004198 Znf_C5HC2 873 932
IPR003349 JmjN 89 122
IPR013637 Lys_sp_deMease-like_dom 946 1290
IPR001606 ARID_dom 157 242
No external refs found!