YBL026W


Description : Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress [Source:SGD;Acc:S000000122]


Gene families : OG_03_0002193 (OF) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YBL026W
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AFR97870 No alias U6 snRNA-associated Sm-like protein LSm2;LSM domain 0.04 OF
CAG77969 No alias LSM domain, eukaryotic/archaea-type 0.05 OF
EAL93818 No alias small nuclear ribonucleoprotein (LSM2), putative 0.04 OF
EDN96782 No alias LSM domain, eukaryotic/archaea-type 0.03 OF
EFI28148 No alias small nuclear ribonucleoprotein LSM2 0.03 OF
EGR51009 No alias LSM domain, eukaryotic/archaea-type 0.03 OF
EJF60417 No alias LSM domain 0.04 OF
ESA44187 No alias LSM domain, eukaryotic/archaea-type 0.04 OF
ESA44188 No alias LSM domain, eukaryotic/archaea-type 0.05 OF
ESU05533 No alias LSM domain, eukaryotic/archaea-type 0.03 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 6 70
No external refs found!