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YER013W


Description : DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase; associates with lariat intermediates before the second catalytic step of splicing; mediates ATP-dependent mRNA release from the spliceosome and unwinds RNA duplexes; required for proofreading the exon ligation reaction [Source:SGD;Acc:S000000815]


Gene families : OG_03_0000045 (OF) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: YER013W
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AFR93170 No alias ATP-dependent RNA helicase DDX35;AAA domain;Helicase... 0.02 OF
AFR97936 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.07 OF
AOA65445 No alias Helicase-associated domain 0.04 OF
AOA66220 No alias Helicase, C-terminal 0.05 OF
CAK97428 No alias Helicase associated domain (HA2) 0.02 OF
CBF70766 No alias mRNA splicing factor RNA helicase 0.04 OF
CBF74845 No alias mRNA splicing factor RNA helicase 0.1 OF
CBF76926 No alias hypothetical protein similar to ATP dependent helicase 0.04 OF
EAA35877 No alias Helicase, C-terminal 0.02 OF
EAL88094 No alias mRNA splicing factor RNA helicase (Prp16), putative 0.03 OF
EAL91525 No alias RNA helicase-like splicing factor (HRH1), putative 0.03 OF
EAL93068 No alias mRNA splicing factor RNA helicase (Cdc28), putative 0.07 OF
EAU85197 No alias ATP-dependent RNA helicase Prp43 0.02 OF
EAU85955 No alias pre-mRNA splicing factor 0.06 OF
EAU92580 No alias ATP-dependent RNA helicase DHX8 0.07 OF
EDN99006 No alias Helicase-associated domain 0.04 OF
EED80851 No alias S1 domain 0.03 OF
EGR45053 No alias Helicase-associated domain 0.03 OF
EGR50716 No alias Helicase, C-terminal 0.07 OF
EJF55621 No alias Helicase conserved C-terminal domain 0.06 OF
EJF57706 No alias DEAD/DEAH box helicase 0.02 OF
ESU05632 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 0.03 OF
ESU10905 No alias ATP-dependent RNA helicase DHX8 0.05 OF
ESU17099 No alias Helicase, C-terminal 0.02 OF
KHC71219 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.07 OF
KHC75427 No alias ATP-dependent RNA helicase DHX8/PRP22;Helicase... 0.07 OF
MGG_02518T0 No alias ATP-dependent RNA helicase DHX8... 0.02 OF
MGG_07501T0 No alias ATP-dependent RNA helicase DHX8... 0.03 OF
MGG_08807T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OF
MGG_11351T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OF
MGG_17793T0 No alias Putative uncharacterized protein... 0.01 OF
POW10235 No alias Domain of unknown function DUF1605;Helicase,... 0.03 OF
POW17111 No alias Domain of unknown function DUF1605;Helicase,... 0.02 OF
SPAC10F6.02c.1 No alias ATP-dependent RNA helicase Prp22... 0.09 OF
SPBC1711.17.1 No alias ATP-dependent RNA helicase Prp16 [Source:PomBase;Acc:SPBC1711.17] 0.03 OF
SPBC19C2.01.1 No alias ATP-dependent RNA helicase Cdc28 [Source:PomBase;Acc:SPBC19C2.01] 0.05 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 875 963
IPR003029 S1_domain 178 250
IPR011709 DUF1605 1021 1097
IPR001650 Helicase_C 682 813
No external refs found!