EGR47935

Description : UPF3 domain

Gene families : OG_03_0003071 (OF) Phylogenetic Tree(s): OG0003071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EGR47935
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AFR96497	No alias	hypothetical protein;Smg-4/UPF3 family	0.03	OF
AOA66163	No alias	UPF3 domain	0.03	OF
CBF89348	No alias	nonsense-mediated mRNA decay protein Upf3, putative	0.07	OF
EAA27485	No alias	UPF3 domain	0.07	OF
ESU06784	No alias	RNA recognition motif domain	0.03	OF
MGG_03912T0	No alias	Putative uncharacterized protein...	0.02	OF
POW02506	No alias	UPF3 domain	0.01	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	502	547
IPR005120	UPF3_dom	47	215

External Links

No external refs found!