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  5. SPCC895.09c.1

SPCC895.09c.1


Description : ATP-dependent RNA helicase Ucp12 (predicted) [Source:PomBase;Acc:SPCC895.09c]


Gene families : OG_03_0001397 (OF) Phylogenetic Tree(s): OG0001397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPCC895.09c.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AFR93551 No alias ATP-dependent RNA helicase A;Helicase associated domain... 0.06 OF
AFR98426 No alias nuclear DNA helicase II;DEAD/DEAH box... 0.05 OF
AOA68158 No alias RWD domain 0.15 OF
CAG81655 No alias Domain of unknown function DUF1605 0.04 OF
CAK42601 No alias RWD domain 0.02 OF
CBF86255 No alias DEAD/DEAH box helicase, putative 0.05 OF
EAA31814 No alias Domain of unknown function DUF1605 0.07 OF
EAL93911 No alias DEAD/DEAH box helicase, putative 0.07 OF
EED54214 No alias DEAD/DEAH box helicase, putative 0.02 OF
ESU13345 No alias DEAD/DEAH box helicase domain 0.03 OF
MGG_07059T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.09 OF
POW05395 No alias Helicase-associated domain;Double-stranded RNA-binding... 0.02 OF
YLR419W No alias Putative helicase with limited sequence similarity to... 0.13 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006575 RWD-domain 402 501
IPR001650 Helicase_C 808 926
IPR007502 Helicase-assoc_dom 1002 1095
IPR011709 DUF1605 1159 1257
IPR011545 DEAD/DEAH_box_helicase_dom 585 742
No external refs found!