Description : RNA-binding protein, involved in chromatin silencing by small RNA, Snd1 [Source:PomBase;Acc:SPCC645.08c]

Gene families : OG_03_0004158 (OF) Phylogenetic Tree(s): OG0004158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: SPCC645.08c.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AOA69355 No alias Tudor domain 0.03 OF
CAG82700 No alias Staphylococcal nuclease (SNase-like), OB-fold 0.02 OF
CAK48126 No alias Staphylococcal nuclease homologue 0.05 OF
EAL91676 No alias transcription factor (Snd1/p100), putative 0.05 OF
EDN91297 No alias Staphylococcal nuclease (SNase-like), OB-fold 0.07 OF
ESU14585 No alias Staphylococcal nuclease (SNase-like), OB-fold 0.04 OF
MGG_12646T0 No alias Nuclease domain-containing protein 1... 0.03 OF
POW06346 No alias Tudor domain;Staphylococcal nuclease (SNase-like), OB-fold 0.07 OF

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002999 Tudor 646 765
IPR016071 Staphylococal_nuclease_OB-fold 352 463
IPR016071 Staphylococal_nuclease_OB-fold 34 140
IPR016071 Staphylococal_nuclease_OB-fold 524 626
IPR016071 Staphylococal_nuclease_OB-fold 197 312
No external refs found!