SPBC609.01.1

Description : ribonuclease II (RNB) family, involved in nuclear-transcribed mRNA catabolic process (predicted) [Source:PomBase;Acc:SPBC609.01]

Gene families : OG_03_0001277 (OF) Phylogenetic Tree(s): OG0001277_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBC609.01.1
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AOA66978	No alias	DIS3-like exonuclease 2, C-terminal	0.02	OF
CAK45390	No alias	Dis3-like cold-shock domain 2 (CSD2)	0.03	OF
EAA32327	No alias	DIS3-like exonuclease 2, C-terminal	0.02	OF
EAL90469	No alias	cell wall biogenesis protein phosphatase Ssd1, putative	0.03	OF
EAU84832	No alias	SSD1 protein	0.03	OF
KHC75365	No alias	hypothetical protein;DIS3-like exonuclease 2 C...	0.03	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004540	ribonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR041505	Dis3_CSD2	501	575
IPR041093	Dis3l2_C	973	1035
IPR001900	RNase_II/R	608	922

External Links

No external refs found!