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  5. SPBC4B4.07c.1

SPBC4B4.07c.1


Description : U1 snRNP-associated protein Usp102 [Source:PomBase;Acc:SPBC4B4.07c]


Gene families : OG_03_0000394 (OF) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC4B4.07c.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AFR93083 No alias hypothetical protein;RNA recognition motif. (a.k.a. RRM,... 0.05 OF
AFR98523 No alias RNA binding protein;RNA recognition motif. (a.k.a. RRM,... 0.03 OF
CAG81306 No alias RNA recognition motif domain 0.02 OF
CAK43175 No alias RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.02 OF
CBF81211 No alias U1 small nuclear ribonucleoprotein A, putative 0.04 OF
EAL88503 No alias U1 small nuclear ribonucleoprotein A, putative 0.03 OF
EAL91420 No alias U1 small nuclear ribonucleoprotein, putative 0.02 OF
EDN92716 No alias RNA recognition motif domain 0.02 OF
EGR51204 No alias RNA recognition motif domain 0.03 OF
ESU05816 No alias RNA recognition motif domain 0.04 OF
KHC79132 No alias hypothetical protein;"RNA recognition motif. (a.k.a.... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 29 98
IPR000504 RRM_dom 177 241
No external refs found!