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  5. SPBC1A4.07c.1

SPBC1A4.07c.1


Description : U3 snoRNP-associated protein Sof1 (predicted) [Source:PomBase;Acc:SPBC1A4.07c]


Gene families : OG_03_0003373 (OF) Phylogenetic Tree(s): OG0003373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC1A4.07c.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AGV15330 No alias WD repeat and SOF domain-containing protein 1;Sof1-like... 0.04 OF
AOA68492 No alias WD domain, G-beta repeat 0.16 OF
CAG81001 No alias WD40 repeat 0.05 OF
CAK43306 No alias WD domain, G-beta repeat 0.22 OF
CBF74442 No alias small nucleolar ribonucleoprotein complex subunit 0.11 OF
EAA27270 No alias WD40 repeat 0.14 OF
EAL88340 No alias small nucleolar ribonucleoprotein complex subunit... 0.19 OF
EDO03263 No alias Sof1-like protein 0.11 OF
EGR47937 No alias WD40 repeat 0.04 OF
EJF56705 No alias WD domain, G-beta repeat 0.07 OF
ESU06767 No alias WD40 repeat 0.11 OF
KHC80005 No alias WD repeat and SOF domain-containing protein 1;Sof1-like... 0.19 OF
MGG_03210T0 No alias U3 small nucleolar RNA associated protein... 0.18 OF
YLL011W No alias Protein required for biogenesis of 40S (small) ribosomal... 0.2 OF

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 61 93
IPR001680 WD40_repeat 309 343
IPR001680 WD40_repeat 265 301
IPR007287 Sof1 345 431
No external refs found!