SPBC17D11.02c.1

Description : synviolin family ubiquitin-protein ligase E3, Hrd1 [Source:PomBase;Acc:SPBC17D11.02c]

Gene families : OG_03_0000922 (OF) Phylogenetic Tree(s): OG0000922_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBC17D11.02c.1
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
AOA69805	No alias	Zinc finger, RING-type	0.04	OF
CAG77733	No alias	Zinc finger, RING-type	0.03	OF
EDO04942	No alias	Zinc finger, RING-H2-type	0.02	OF
ESU07245	No alias	Zinc finger, RING-H2-type	0.04	OF
YDR143C	No alias	Ubiquitin-protein ligase; involved in...	0.02	OF
YOL013C	No alias	Ubiquitin-protein ligase involved in ER-associated...	0.04	OF

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR024766	Znf_RING_H2	291	351

External Links

No external refs found!