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  5. SPBC1711.17.1

SPBC1711.17.1


Description : ATP-dependent RNA helicase Prp16 [Source:PomBase;Acc:SPBC1711.17]


Gene families : OG_03_0000045 (OF) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SPBC1711.17.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AFR93170 No alias ATP-dependent RNA helicase DDX35;AAA domain;Helicase... 0.03 OF
AFR95186 No alias ATP-dependent RNA helicase... 0.02 OF
AFR97936 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OF
AOA65445 No alias Helicase-associated domain 0.03 OF
AOA66220 No alias Helicase, C-terminal 0.05 OF
CAG80826 No alias Domain of unknown function DUF1605 0.03 OF
CBF70766 No alias mRNA splicing factor RNA helicase 0.04 OF
CBF74845 No alias mRNA splicing factor RNA helicase 0.07 OF
CBF76926 No alias hypothetical protein similar to ATP dependent helicase 0.03 OF
EAA31559 No alias Helicase-associated domain 0.02 OF
EAA33344 No alias Helicase-associated domain 0.03 OF
EAA35877 No alias Helicase, C-terminal 0.03 OF
EAL90253 No alias ATP dependent RNA helicase, putative 0.02 OF
EAL91525 No alias RNA helicase-like splicing factor (HRH1), putative 0.04 OF
EAL93068 No alias mRNA splicing factor RNA helicase (Cdc28), putative 0.03 OF
EAU85197 No alias ATP-dependent RNA helicase Prp43 0.03 OF
EAU85955 No alias pre-mRNA splicing factor 0.03 OF
EAU92580 No alias ATP-dependent RNA helicase DHX8 0.04 OF
EAU93276 No alias pre-mRNA splicing factor 0.02 OF
EDN95366 No alias Helicase, C-terminal 0.04 OF
EDN99006 No alias Helicase-associated domain 0.07 OF
EDO00044 No alias DEAD/DEAH box helicase domain 0.03 OF
EED80851 No alias S1 domain 0.06 OF
EGR45439 No alias Domain of unknown function DUF1605 0.02 OF
EGR50716 No alias Helicase, C-terminal 0.02 OF
EJF55621 No alias Helicase conserved C-terminal domain 0.04 OF
EJF57706 No alias DEAD/DEAH box helicase 0.02 OF
ESU05632 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 0.03 OF
KHC71219 No alias pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.05 OF
KHC75427 No alias ATP-dependent RNA helicase DHX8/PRP22;Helicase... 0.02 OF
MGG_03893T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.03 OF
MGG_07501T0 No alias ATP-dependent RNA helicase DHX8... 0.03 OF
MGG_11351T0 No alias Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.04 OF
POW10235 No alias Domain of unknown function DUF1605;Helicase,... 0.05 OF
POW17111 No alias Domain of unknown function DUF1605;Helicase,... 0.02 OF
YER013W No alias DEAH-box RNA-dependent ATPase/ATP-dependent RNA... 0.03 OF

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011709 DUF1605 1028 1105
IPR001650 Helicase_C 691 821
IPR007502 Helicase-assoc_dom 885 970
IPR011545 DEAD/DEAH_box_helicase_dom 498 651
No external refs found!