SPBC11B10.10c.1

Description : histone H2A variant H2A.Z, Pht1 [Source:PomBase;Acc:SPBC11B10.10c]

Gene families : OG_03_0001985 (OF) Phylogenetic Tree(s): OG0001985_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SPBC11B10.10c.1
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AFR94476	No alias	histone H2A.Z;C-terminus of histone H2A;Core histone...	0.1	OF
AOA70046	No alias	Histone H2A, C-terminal domain	0.13	OF
CAG77726	No alias	Histone H2A, C-terminal domain	0.04	OF
EAU87700	No alias	histone H2A	0.03	OF
EDN97124	No alias	Histone H2A/H2B/H3	0.02	OF
EED83580	No alias	Histone H2A, C-terminal domain	0.02	OF
EJF55915	No alias	Core histone H2A/H2B/H3/H4	0.03	OF
ESU06966	No alias	histone H2A.Z	0.03	OF
KHC78898	No alias	histone H2A.Z;Core histone H2A/H2B/H3/H4;C-terminus of...	0.08	OF

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	20	100
IPR032454	Histone_H2A_C	101	131

External Links

No external refs found!